for single cell ATACseq experiment, one gets a merged bam file for all cells. After going through clustering, one groups similar cells into cell types (cell states). This workflow will split the bam ...

Abstract: Assay of single cell transposase-accessible chromatin with high-throughput sequencing (scATAC-seq) have enabled massively profiling of the chromatin accessibility landscape at the ...

The sequencing data and raw count matrices have been deposited on Gene Expression Omnibus: GSE225169 and are publicly available as of the date of publication. Normalized data, ILC annotations and ...

Kidney inflammation plays a crucial role in the pathogenesis of IgA nephropathy (IgAN), yet the specific phenotypes of immune cells involved in disease progression remain incompletely understood.